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DNA Electrophoresis Protocols for Forensic Genetics

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Cover of 'DNA Electrophoresis Protocols for Forensic Genetics'

Table of Contents

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    Book Overview
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    Chapter 1 An Overview of DNA Typing Methods for Human Identification: Past, Present, and Future
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    Chapter 2 Capillary Electrophoresis and 5-Channel LIF Detection of a 26plex Autosomal STR Assay for Human Identification
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    Chapter 3 Capillary Electrophoresis of MiniSTR Markers to Genotype Highly Degraded DNA Samples
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    Chapter 4 Interpretation Guidelines of a Standard Y-chromosome STR 17-plex PCR-CE Assay for Crime Casework.
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    Chapter 5 Capillary Electrophoresis of an X-Chromosome STR Decaplex for Kinship Deficiency Cases
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    Chapter 6 A 48-plex Autosomal SNP GenPlex™ Assay for Human Individualization and Relationship Testing
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    Chapter 7 Typing of 49 Autosomal SNPs by Single Base Extension and Capillary Electrophoresis for Forensic Genetic Testing
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    Chapter 8 A 34-plex Autosomal SNP Single Base Extension Assay for Ancestry Investigations
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    Chapter 9 SNaPshot® Minisequencing Analysis of Multiple Ancestry-Informative Y-SNPs Using Capillary Electrophoresis
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    Chapter 10 Capillary Electrophoresis of 38 Noncoding Biallelic Mini-Indels for Degraded Samples and as Complementary Tool in Paternity Testing
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    Chapter 11 Capillary Electrophoresis of an 11-Plex mtDNA Coding Region SNP Single Base Extension Assay for Discrimination of the Most Common Caucasian HV1/HV2 Mitotype
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    Chapter 12 Capillary Electrophoresis of a Multiplex Reverse Transcription-Polymerase Chain Reaction to Target Messenger RNA Markers for Body Fluid Identification
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    Chapter 13 DNA Extraction from Aged Skeletal Samples for STR Typing by Capillary Electrophoresis
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    Chapter 14 Interpretation Guidelines for Multilocus STR Forensic Profiles from Low Template DNA Samples
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    Chapter 15 Interpretation Guidelines for Mixed-STR Multilocus Electrophoretic Profiles
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    Chapter 16 Capillary Electrophoresis Analysis of a 9-plex STR Assay for Canine Genotyping
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    Chapter 17 Capillary Electrophoresis of DNA from Cannabis sativa for Correlation of Samples to Geographic Origin
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    Chapter 18 Capillary electrophoresis of multigene barcoding chloroplast markers for species identification of botanical trace evidence.
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    Chapter 19 Capillary Electrophoresis of Big-Dye Terminator Sequencing Reactions for Human mtDNA Control Region Haplotyping in the Identification of Human Remains.
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    Chapter 20 Capillary Electrophoresis of Human mtDNA Control Region Sequences from Highly Degraded Samples Using Short mtDNA Amplicons
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    Chapter 21 Interpretation Guidelines of mtDNA Control Region Sequence Electropherograms in Forensic Genetics
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    Chapter 22 DNA Electrophoresis Protocols for Forensic Genetics
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    Chapter 23 Sequence Analysis of the Canine Mitochondrial DNA Control Region from Shed Hair Samples in Criminal Investigations
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    Chapter 24 Integrated Sample Cleanup and Microchip Capillary Array Electrophoresis for High-Performance Forensic STR Profiling
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    Chapter 25 Microchip Capillary Electrophoresis Protocol to Evaluate Quality and Quantity of mtDNA Amplified Fragments for DNA Sequencing in Forensic Genetics
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    Chapter 26 Microchip Capillary Electrophoresis of Multi-locus VNTR Analysis for Genotyping of Bacillus Anthracis and Yersinia Pestis in Microbial Forensic Cases
Attention for Chapter 18: Capillary electrophoresis of multigene barcoding chloroplast markers for species identification of botanical trace evidence.
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Chapter title
Capillary electrophoresis of multigene barcoding chloroplast markers for species identification of botanical trace evidence.
Chapter number 18
Book title
DNA Electrophoresis Protocols for Forensic Genetics
Published in
Methods in molecular biology, January 2012
DOI 10.1007/978-1-61779-461-2_18
Pubmed ID
Book ISBNs
978-1-61779-460-5, 978-1-61779-461-2
Authors

Gianmarco Ferri, Beatrice Corradini, Milena Alù, Ferri, Gianmarco, Corradini, Beatrice, Alù, Milena

Abstract

The analysis of nonhuman biological evidence both animal and botanical to find out the correct species of a sample comes as a great help to crime investigators. Particularly, forensic botany may be useful in many criminal and civil cases, e.g., for linking an individual to a crime scene or physical evidence to a geographic location, or tracking marijuana distribution patterns.Despite many molecular techniques for species identification so far applied, botanical evidences are still overlooked by forensic scientists due to the lack of reproducible and efficient protocols standardized across a wide range of different organisms and among different laboratories.Recently, the term "DNA barcoding" has been coined to describe the use of a short gene sequence from a standardized region of the genome as a molecular tool for species identification. DNA barcodes have been successfully applied to a number of animal groups and introduced in forensic science with the application of the mitochondrial gene COI. Building on this success, ongoing investigations have searched for the best barcode to apply to all land plants. Here we describe the basic protocol based on amplification and sequence analysis of barcoding markers for land plants considering the latest developments of Plant DNA barcoding Project. The aim of this chapter is to provide forensic scientists an accurate and reliable tool for assigning unidentified botanical specimens to the correct species as powerful mainstay in investigations, increasing the contributions from nonhuman DNA to forensics.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 8 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 8 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 25%
Other 1 13%
Student > Doctoral Student 1 13%
Lecturer 1 13%
Student > Master 1 13%
Other 1 13%
Unknown 1 13%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 25%
Biochemistry, Genetics and Molecular Biology 1 13%
Computer Science 1 13%
Economics, Econometrics and Finance 1 13%
Medicine and Dentistry 1 13%
Other 0 0%
Unknown 2 25%