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RT-PCR Protocols

Overview of attention for book
Cover of 'RT-PCR Protocols'

Table of Contents

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    Book Overview
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    Chapter 1 Single Cell RT-PCR on Mouse Embryos: A General Approach for Developmental Biology
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    Chapter 2 Poly(A) cDNA Real-Time PCR for Indicator Gene Measurement in Cancer
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    Chapter 3 Transcriptome Profiling of Host–Microbe Interactions by Differential Display RT-PCR
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    Chapter 4 Quantitative RT-PCR Methods for Mature microRNA Expression Analysis
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    Chapter 5 Detection of Influenza A Virus Neuraminidase and PB2 Gene Segments by One Step Reverse Transcription Polymerase Chain Reaction
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    Chapter 6 Detection and Identification of CD46 Splicing Isoforms by Nested RT-PCR
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    Chapter 7 Simultaneous Detection of Bluetongue Virus RNA, Internal Control GAPDH mRNA, and External Control Synthetic RNA by Multiplex Real-Time PCR
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    Chapter 8 RT-PCR Protocols
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    Chapter 9 Detection of antisense RNA transcripts by strand-specific RT-PCR.
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    Chapter 10 RT-PCR Amplification and Cloning of Large Viral Sequences
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    Chapter 11 One-Step RT-LATE-PCR for mRNA and Viral RNA Detection and Quantification
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    Chapter 12 Changes in Gene Expression of Caveolin-1 After Inflammatory Pain Using Quantitative Real-Time PCR
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    Chapter 13 Real-Time Quantitative Reverse Transcriptase Polymerase Chain Reaction
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    Chapter 14 The use of comparative quantitative RT-PCR to investigate the effect of cysteine incubation on GPx1 expression in freshly isolated cardiomyocytes.
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    Chapter 15 The Renaissance of Competitive PCR as an Accurate Tool for Precise Nucleic Acid Quantification
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    Chapter 16 Skeletal Muscle RNA Extraction in Preparation for RT-PCR
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    Chapter 17 Reverse Transcription of the Ribonucleic Acid: The First Step in RT-PCR Assay
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    Chapter 18 Primer Design for RT-PCR
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    Chapter 19 Hot Start PCR
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    Chapter 20 Real-time RT-PCR for Automated Detection of HIV-1 RNA During Blood Donor Screening
Attention for Chapter 14: The use of comparative quantitative RT-PCR to investigate the effect of cysteine incubation on GPx1 expression in freshly isolated cardiomyocytes.
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About this Attention Score

  • Above-average Attention Score compared to outputs of the same age and source (55th percentile)

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Chapter title
The use of comparative quantitative RT-PCR to investigate the effect of cysteine incubation on GPx1 expression in freshly isolated cardiomyocytes.
Chapter number 14
Book title
RT-PCR Protocols
Published in
Methods in molecular biology, March 2010
DOI 10.1007/978-1-60761-629-0_14
Pubmed ID
Book ISBNs
978-1-60761-628-3, 978-1-60761-629-0
Authors

King N, Nicola King, King, Nicola

Abstract

Intracellular cysteine availability is one of the major rate limiting factors that regulate the synthesis of the major antioxidant, glutathione. Little is known, however, about the effect of cysteine upon glutathione-associated enzymes in isolated heart cells. Such knowledge is important if a full understanding and exploitation of cysteine's cardioprotective potential is to be achieved. Therefore, this study describes the use of a comparative quantitative reverse transcription polymerase chain reaction (RT-PCR) assay to investigate the effect of incubation of freshly isolated rat cardiomyocytes for 2 h at 37 degrees C with or without 0.5 mM cysteine on the expression of cellular glutathione peroxidase (GPx1). The main analytical method is the conventional RT-PCR in a standard thermal cycler followed by electrophoresis and scanning densitometry using the expression of the housekeeping gene, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), for normalising purposes. Each step of this straight-forward and relatively inexpensive method is explained in detail to facilitate its adoption by the reader for experiments investigating the effects of any compound on any gene in any cell population. The results of the current investigation show that cysteine incubation significantly increases the expression of GPx1 in freshly isolated cardiomyocytes compared to control, suggesting the possibility of a new beneficial role for cysteine in myocardial protection.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 8 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 8 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 3 38%
Student > Bachelor 1 13%
Student > Doctoral Student 1 13%
Lecturer 1 13%
Unknown 2 25%
Readers by discipline Count As %
Agricultural and Biological Sciences 3 38%
Biochemistry, Genetics and Molecular Biology 1 13%
Medicine and Dentistry 1 13%
Unknown 3 38%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 16 February 2022.
All research outputs
#7,588,614
of 23,138,859 outputs
Outputs from Methods in molecular biology
#2,355
of 13,274 outputs
Outputs of similar age
#34,873
of 95,239 outputs
Outputs of similar age from Methods in molecular biology
#2
of 20 outputs
Altmetric has tracked 23,138,859 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,274 research outputs from this source. They receive a mean Attention Score of 3.4. This one has done well, scoring higher than 76% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 95,239 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 22nd percentile – i.e., 22% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 20 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 55% of its contemporaries.