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Systems Biology

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Cover of 'Systems Biology'

Table of Contents

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    Book Overview
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    Chapter 1 Conceptual Challenges in the Theoretical Foundations of Systems Biology
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    Chapter 2 An Integrative Approach Toward Biology, Organisms, and Cancer
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    Chapter 3 Conceptual Challenges of the Systemic Approach in Understanding Cell Differentiation
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    Chapter 4 A Primer on Mathematical Modeling in the Study of Organisms and Their Parts
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    Chapter 5 The Search for System’s Parameters
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    Chapter 6 Inverse Problems in Systems Biology: A Critical Review
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    Chapter 7 Systems Biology Approach and Mathematical Modeling for Analyzing Phase-Space Switch During Epithelial-Mesenchymal Transition
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    Chapter 8 Parameters Estimation in Phase-Space Landscape Reconstruction of Cell Fate: A Systems Biology Approach
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    Chapter 9 Complexity of Biochemical and Genetic Responses Reduced Using Simple Theoretical Models
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    Chapter 10 Systems Biology Modeling of Nonlinear Cancer Dynamics
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    Chapter 11 Endogenous Molecular-Cellular Network Cancer Theory: A Systems Biology Approach
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    Chapter 12 A Network-Based Integrative Workflow to Unravel Mechanisms Underlying Disease Progression
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    Chapter 13 Spatiotemporal Fluctuation Analysis of Molecular Diffusion Laws in Live-Cell Membranes
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    Chapter 14 A Method for Cross-Species Visualization and Analysis of RNA-Sequence Data
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    Chapter 15 Multi-agent Simulations of Population Behavior: A Promising Tool for Systems Biology
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    Chapter 16 Metabolomics: Challenges and Opportunities in Systems Biology Studies
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    Chapter 17 Systems Biology-Driven Hypotheses Tested In Vivo: The Need to Advancing Molecular Imaging Tools
Attention for Chapter 13: Spatiotemporal Fluctuation Analysis of Molecular Diffusion Laws in Live-Cell Membranes
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Chapter title
Spatiotemporal Fluctuation Analysis of Molecular Diffusion Laws in Live-Cell Membranes
Chapter number 13
Book title
Systems Biology
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7456-6_13
Pubmed ID
Book ISBNs
978-1-4939-7455-9, 978-1-4939-7456-6
Authors

Francesco Cardarelli

Abstract

A present challenge of membrane biophysics is deciphering the dynamic behavior of molecules, such as lipids and proteins, within the natural environment of a living-cell membrane. Here, a fluorescence fluctuation-based approach will be described, which makes it possible to probe the "diffusion law" of molecules directly from imaging, in the form of a mean square displacement vs time-delay plot (iMSD), with no need for interpretative models. Of note, the presented approach does not require extraction of the molecular trajectories nor the use of bright fluorophores. Conversely, it can be used at high fluorophore density and with relatively dim fluorophores, such as GFP-tagged molecules transiently expressed within cells. The ability of this approach to resolve average molecular dynamic properties well below the diffraction limit will be discussed. Overall, this novel approach is proposed as a powerful tool for the determination of kinetic and thermodynamic parameters over wide spatial and temporal scales.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 33%
Unspecified 1 17%
Student > Ph. D. Student 1 17%
Professor 1 17%
Unknown 1 17%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 33%
Unspecified 1 17%
Biochemistry, Genetics and Molecular Biology 1 17%
Chemistry 1 17%
Unknown 1 17%