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Research in Computational Molecular Biology

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Cover of 'Research in Computational Molecular Biology'

Table of Contents

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    Book Overview
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    Chapter 1 Boosting Alignment Accuracy by Adaptive Local Realignment
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    Chapter 2 A Concurrent Subtractive Assembly Approach for Identification of Disease Associated Sub-metagenomes
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    Chapter 3 A Flow Procedure for the Linearization of Genome Sequence Graphs
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    Chapter 4 Dynamic Alignment-Free and Reference-Free Read Compression
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    Chapter 5 A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases
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    Chapter 6 Determining the Consistency of Resolved Triplets and Fan Triplets
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    Chapter 7 Progressive Calibration and Averaging for Tandem Mass Spectrometry Statistical Confidence Estimation: Why Settle for a Single Decoy?
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    Chapter 8 Resolving Multicopy Duplications de novo Using Polyploid Phasing
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    Chapter 9 A Bayesian Active Learning Experimental Design for Inferring Signaling Networks
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    Chapter 10 $$BBK^*$$ (Branch and Bound over $$K^*$$ ): A Provable and Efficient Ensemble-Based Algorithm to Optimize Stability and Binding Affinity over Large Sequence Spaces
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    Chapter 11 Superbubbles, Ultrabubbles and Cacti
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    Chapter 12 EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM Indices
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    Chapter 13 A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference
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    Chapter 14 Towards Recovering Allele-Specific Cancer Genome Graphs
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    Chapter 15 Using Stochastic Approximation Techniques to Efficiently Construct Confidence Intervals for Heritability
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    Chapter 16 Improved Search of Large Transcriptomic Sequencing Databases Using Split Sequence Bloom Trees
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    Chapter 17 AllSome Sequence Bloom Trees
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    Chapter 18 Longitudinal Genotype-Phenotype Association Study via Temporal Structure Auto-learning Predictive Model
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    Chapter 19 Improving Imputation Accuracy by Inferring Causal Variants in Genetic Studies
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    Chapter 20 The Copy-Number Tree Mixture Deconvolution Problem and Applications to Multi-sample Bulk Sequencing Tumor Data
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    Chapter 21 Quantifying the Impact of Non-coding Variants on Transcription Factor-DNA Binding
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    Chapter 22 aBayesQR: A Bayesian Method for Reconstruction of Viral Populations Characterized by Low Diversity
Attention for Chapter 5: A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases
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Chapter title
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases
Chapter number 5
Book title
Research in Computational Molecular Biology
Published by
Springer, Cham, May 2017
DOI 10.1007/978-3-319-56970-3_5
Book ISBNs
978-3-31-956969-7, 978-3-31-956970-3
Authors

Chirag Jain, Alexander Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy, Jain, Chirag, Dilthey, Alexander, Koren, Sergey, Aluru, Srinivas, Phillippy, Adam M.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 46 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 46 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 13 28%
Researcher 8 17%
Student > Master 7 15%
Other 5 11%
Student > Bachelor 2 4%
Other 3 7%
Unknown 8 17%
Readers by discipline Count As %
Computer Science 17 37%
Biochemistry, Genetics and Molecular Biology 9 20%
Agricultural and Biological Sciences 8 17%
Engineering 2 4%
Environmental Science 1 2%
Other 1 2%
Unknown 8 17%