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MicroRNA Detection and Target Identification

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Cover of 'MicroRNA Detection and Target Identification'

Table of Contents

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    Book Overview
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    Chapter 1 Improved Denaturation of Small RNA Duplexes and Its Application for Northern Blotting
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    Chapter 2 High-Throughput RT-qPCR for the Analysis of Circulating MicroRNAs
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    Chapter 3 Genome-Wide Comparison of Next-Generation Sequencing and qPCR Platforms for microRNA Profiling in Serum
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    Chapter 4 Small RNA Profiling by Next-Generation Sequencing Using High-Definition Adapters
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    Chapter 5 Surface Acoustic Wave Lysis and Ion-Exchange Membrane Quantification of Exosomal MicroRNA
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    Chapter 6 Droplet Microfluidic Device Fabrication and Use for Isothermal Amplification and Detection of MicroRNA
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    Chapter 7 Interrogation of Functional miRNA–Target Interactions by CRISPR/Cas9 Genome Engineering
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    Chapter 8 Cell-Free Urinary MicroRNAs Expression in Small-Scale Experiments
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    Chapter 9 Peptide-Based Isolation of Argonaute Protein Complexes Using Ago-APP
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    Chapter 10 Predicting Functional MicroRNA-mRNA Interactions
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    Chapter 11 Computational and Experimental Identification of Tissue-Specific MicroRNA Targets
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    Chapter 12 sRNAtoolboxVM: Small RNA Analysis in a Virtual Machine
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    Chapter 13 An Assessment of the Next Generation of Animal miRNA Target Prediction Algorithms
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    Chapter 14 The UEA Small RNA Workbench: A Suite of Computational Tools for Small RNA Analysis
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    Chapter 15 Prediction of miRNA–mRNA Interactions Using miRGate
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    Chapter 16 Detection of microRNAs Using Chip-Based QuantStudio 3D Digital PCR
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    Chapter 17 MiRNA Quantitation with Microelectrode Sensors Enabled by Enzymeless Electrochemical Signal Amplification
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    Chapter 18 A Robust Protocol to Quantify Circulating Cancer Biomarker MicroRNAs
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    Chapter 19 MicroRNAs, Regulatory Networks, and Comorbidities: Decoding Complex Systems
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    Chapter 20 Label-Free Direct Detection of MiRNAs with Poly-Silicon Nanowire Biosensors
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    Chapter 21 Erratum to: Cell-Free Urinary MicroRNAs Expression in Small-Scale Experiments
Attention for Chapter 6: Droplet Microfluidic Device Fabrication and Use for Isothermal Amplification and Detection of MicroRNA
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Chapter title
Droplet Microfluidic Device Fabrication and Use for Isothermal Amplification and Detection of MicroRNA
Chapter number 6
Book title
MicroRNA Detection and Target Identification
Published in
Methods in molecular biology, April 2017
DOI 10.1007/978-1-4939-6866-4_6
Pubmed ID
Book ISBNs
978-1-4939-6864-0, 978-1-4939-6866-4
Authors

Maria Chiara Giuffrida, Roberta D’Agata, Giuseppe Spoto

Editors

Tamas Dalmay

Abstract

Droplet microfluidics combined with the isothermal circular strand displacement polymerization (ICSDP) represents a powerful new technique to detect both single-stranded DNA and microRNA sequences. The method here described helps in overcoming some drawbacks of the lately introduced droplet polymerase chain reaction (PCR) amplification when implemented in microfluidic devices. The method also allows the detection of nanoliter droplets of nucleic acids sequences solutions, with a particular attention to microRNA sequences that are detected at the picomolar level. The integration of the ICSDP amplification protocol in droplet microfluidic devices reduces the time of analysis and the amount of sample required. In addition, there is also the possibility to design parallel analyses to be integrated in portable devices.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 3 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 3 100%

Demographic breakdown

Readers by professional status Count As %
Professor 1 33%
Researcher 1 33%
Unknown 1 33%
Readers by discipline Count As %
Chemistry 1 33%
Unknown 2 67%