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Base Excision Repair Pathway

Overview of attention for book
Cover of 'Base Excision Repair Pathway'

Table of Contents

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    Book Overview
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    Chapter 1 Simultaneous Short- and Long-Patch Base Excision Repair (BER) Assay in Live Mammalian Cells
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    Chapter 2 In Vitro Assay to Measure APE1 Enzymatic Activity on Ribose Monophosphate Abasic Site
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    Chapter 3 Highly Sensitive Radioactivity-Based DNA 3′-Phosphatase Activity Assay for Polynucleotide Kinase 3′-Phosphatase
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    Chapter 4 Generation of Recombinant Nucleosomes Containing Site-Specific DNA Damage
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    Chapter 5 A DNA Cleavage Assay Using Synthetic Oligonucleotide Containing a Single Site-Directed Lesion for In Vitro Base Excision Repair Study
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    Chapter 6 In Vitro Reconstitutive Base Excision Repair (BER) Assay
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    Chapter 7 Detection of Oxidatively Modified Base Lesion(s) in Defined DNA Sequences by FLARE Quantitative PCR
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    Chapter 8 Isolation and Immunodetection of Enzymatic DNA–Protein Crosslinks by RADAR Assay
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    Chapter 9 Slot Blot Assay for Detection of R Loops
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    Chapter 10 Assays with Patient-Derived Organoids to Evaluate the Impact of Microbial Infection on Base Excision Repair (BER) Enzymes
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    Chapter 11 Characterizing the Repair of DNA Double-Strand Breaks: A Review of Surrogate Plasmid-Based Reporter Methods
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    Chapter 12 Interactome Profiling of DNA Damage Response (DDR) Mediators with Immunoprecipitation-Mass Spectrometry
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    Chapter 13 Using Affinity Pulldown Assays to Study Protein–Protein Interactions of Human NEIL1 Glycosylase and the Checkpoint Protein RAD9–RAD1–HUS1 (9-1-1) Complex
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    Chapter 14 Tandem Affinity Purification and Mass-Spectrometric Analysis of FACT and Associated Proteins
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    Chapter 15 Analysis of Copy Number Variation of DNA Repair/Damage Response Genes in Tumor Tissues
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    Chapter 16 Genome-Wide Binding Analysis of DNA Repair Protein APE1 in Tumor Cells by ChIP-Seq
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    Chapter 17 Tumorsphere Formation Assay: A Cancer Stem-Like Cell Characterization in Pediatric Brain Cancer Medulloblastoma
Attention for Chapter 15: Analysis of Copy Number Variation of DNA Repair/Damage Response Genes in Tumor Tissues
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Summary
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Chapter title
Analysis of Copy Number Variation of DNA Repair/Damage Response Genes in Tumor Tissues
Chapter number 15
Book title
Base Excision Repair Pathway
Published by
Humana, New York, NY, January 2023
DOI 10.1007/978-1-0716-3373-1_15
Book ISBNs
978-1-07-163372-4, 978-1-07-163373-1
Authors

Izumi, Tadahide

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