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Proteome Bioinformatics

Overview of attention for book
Cover of 'Proteome Bioinformatics'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 An Introduction to Proteome Bioinformatics.
  3. Altmetric Badge
    Chapter 2 Proteomic Data Storage and Sharing.
  4. Altmetric Badge
    Chapter 3 Choosing an Optimal Database for Protein Identification from Tandem Mass Spectrometry Data.
  5. Altmetric Badge
    Chapter 4 Label-Based and Label-Free Strategies for Protein Quantitation.
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    Chapter 5 TMT One-Stop Shop: From Reliable Sample Preparation to Computational Analysis Platform.
  7. Altmetric Badge
    Chapter 6 Unassigned MS/MS Spectra: Who Am I?
  8. Altmetric Badge
    Chapter 7 Methods to Calculate Spectrum Similarity.
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    Chapter 8 Proteotypic Peptides and Their Applications.
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    Chapter 9 Statistical Evaluation of Labeled Comparative Profiling Proteomics Experiments Using Permutation Test.
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    Chapter 10 De Novo Peptide Sequencing: Deep Mining of High-Resolution Mass Spectrometry Data.
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    Chapter 11 Phylogenetic Analysis Using Protein Mass Spectrometry.
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    Chapter 12 Bioinformatics Methods to Deduce Biological Interpretation from Proteomics Data.
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    Chapter 13 A Systematic Bioinformatics Approach to Identify High Quality Mass Spectrometry Data and Functionally Annotate Proteins and Proteomes.
  15. Altmetric Badge
    Chapter 14 Network Tools for the Analysis of Proteomic Data.
  16. Altmetric Badge
    Chapter 15 Determining the Significance of Protein Network Features and Attributes Using Permutation Testing.
  17. Altmetric Badge
    Chapter 16 Bioinformatics Tools and Resources for Analyzing Protein Structures.
  18. Altmetric Badge
    Chapter 17 In Silico Approach to Identify Potential Inhibitors for Axl-Gas6 Signaling.
Attention for Chapter 8: Proteotypic Peptides and Their Applications.
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About this Attention Score

  • Above-average Attention Score compared to outputs of the same age (53rd percentile)
  • Good Attention Score compared to outputs of the same age and source (72nd percentile)

Mentioned by

patent
1 patent

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24 Mendeley
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Chapter title
Proteotypic Peptides and Their Applications.
Chapter number 8
Book title
Proteome Bioinformatics
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-6740-7_8
Pubmed ID
Book ISBNs
978-1-4939-6738-4, 978-1-4939-6740-7
Authors

Shivakumar Keerthikumar, Suresh Mathivanan, Keerthikumar, Shivakumar, Mathivanan, Suresh

Editors

Shivakumar Keerthikumar, Suresh Mathivanan

Abstract

Recent advances in mass spectrometry based proteomic techniques and publicly available large proteomic repositories are being exploited to characterize the proteome of multiple organisms. While humongous amount of proteomic data is being acquired and analyzed, many biological questions still remain unanswered. Proteotypic peptides which uniquely represent target proteins or a protein isoform are used as an alternative strategy for protein identification in the field of immunological methods and targeted proteomic techniques. Using different computational approaches, resources and techniques used in the identification of proteotypic peptides of target proteins is discussed here.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 24 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 24 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 17%
Student > Master 3 13%
Student > Bachelor 2 8%
Professor > Associate Professor 2 8%
Student > Ph. D. Student 1 4%
Other 1 4%
Unknown 11 46%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 7 29%
Agricultural and Biological Sciences 3 13%
Medicine and Dentistry 2 8%
Computer Science 1 4%
Unknown 11 46%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 01 July 2021.
All research outputs
#7,496,019
of 22,914,829 outputs
Outputs from Methods in molecular biology
#2,328
of 13,131 outputs
Outputs of similar age
#141,115
of 420,479 outputs
Outputs of similar age from Methods in molecular biology
#246
of 1,074 outputs
Altmetric has tracked 22,914,829 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,131 research outputs from this source. They receive a mean Attention Score of 3.4. This one has done well, scoring higher than 76% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 420,479 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 53% of its contemporaries.
We're also able to compare this research output to 1,074 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 72% of its contemporaries.