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Chromatin Accessibility

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Cover of 'Chromatin Accessibility'

Table of Contents

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    Book Overview
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    Chapter 1 Genome-Wide Mapping of Active Regulatory Elements Using ATAC-seq
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    Chapter 2 Mapping Nucleosome Location Using FS-Seq
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    Chapter 3 Universal NicE-Seq: A Simple and Quick Method for Accessible Chromatin Detection in Fixed Cells
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    Chapter 4 Measuring Inaccessible Chromatin Genome-Wide Using Protect-seq
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    Chapter 5 Determination of the Chromatin Openness in Bacterial Genomes
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    Chapter 6 Profiling Chromatin Accessibility on Replicated DNA with repli-ATAC-Seq
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    Chapter 7 Analysis of Chromatin Interaction and Accessibility by Trac-Looping
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    Chapter 8 Single-Molecule Mapping of Chromatin Accessibility Using NOMe-seq/dSMF
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    Chapter 9 ORE-Seq: Genome-Wide Absolute Occupancy Measurement by Restriction Enzyme Accessibilities
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    Chapter 10 Single-Cell Joint Profiling of Open Chromatin and Transcriptome by Paired-Seq
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    Chapter 11 Simultaneous Single-Cell Profiling of the Transcriptome and Accessible Chromatin Using SHARE-seq
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    Chapter 12 Simultaneous Measurement of DNA Methylation and Nucleosome Occupancy in Single Cells Using scNOMe-Seq
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    Chapter 13 Massively Parallel Profiling of Accessible Chromatin and Proteins with ASAP-Seq
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    Chapter 14 Concomitant Sequencing of Accessible Chromatin and Mitochondrial Genomes in Single Cells Using mtscATAC-Seq
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    Chapter 15 ATAC-See: A Tn5 Transposase-Mediated Assay for Detection of Chromatin Accessibility with Imaging
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    Chapter 16 NicE-viewSeq: An Integrative Visualization and Genomics Method to Detect Accessible Chromatin in Fixed Cells
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    Chapter 17 ATAC-seq Data Processing
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    Chapter 18 Deep Learning on Chromatin Accessibility
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Title
Chromatin Accessibility
Published by
Springer US, March 2023
DOI 10.1007/978-1-0716-2899-7
ISBNs
978-1-07-162898-0, 978-1-07-162899-7
Editors

Marinov, Georgi K., Greenleaf, William J.

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