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The Golgi Complex

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Cover of 'The Golgi Complex'

Table of Contents

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    Book Overview
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    Chapter 1 4D Confocal Imaging of Yeast Organelles
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    Chapter 2 Imaging the Polarized Sorting of Proteins from the Golgi Complex in Live Neurons
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    Chapter 3 Imaging Golgi Outposts in Fixed and Living Neurons
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    Chapter 4 Analysis of Arf1 GTPase-Dependent Membrane Binding and Remodeling Using the Exomer Secretory Vesicle Cargo Adaptor
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    Chapter 5 STEM Tomography Imaging of Hypertrophied Golgi Stacks in Mucilage-Secreting Cells
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    Chapter 6 Reconstitution of COPI Vesicle and Tubule Formation
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    Chapter 7 Reconstitution of Phospholipase A2-Dependent Golgi Membrane Tubules
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    Chapter 8 Proteomic Characterization of Golgi Membranes Enriched from Arabidopsis Suspension Cell Cultures
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    Chapter 9 High-Content Analysis of the Golgi Complex by Correlative Screening Microscopy
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    Chapter 10 Activity Detection of GalNAc Transferases by Protein-Based Fluorescence Sensors In Vivo
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    Chapter 11 In Situ Proximity Ligation Assay (PLA) Analysis of Protein Complexes Formed Between Golgi-Resident, Glycosylation-Related Transporters and Transferases in Adherent Mammalian Cell Cultures
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    Chapter 12 Creating Knockouts of Conserved Oligomeric Golgi Complex Subunits Using CRISPR-Mediated Gene Editing Paired with a Selection Strategy Based on Glycosylation Defects Associated with Impaired COG Complex Function
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    Chapter 13 Reversible Controlled Aggregation of Golgi Resident Enzymes to Assess Their Transport/Dynamics Along the Secretory Pathway
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    Chapter 14 Assays to Study the Fragmentation of the Golgi Complex During the G2–M Transition of the Cell Cycle
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    Chapter 15 The Role of Lysophospholipid Acyltransferases in the Golgi Complex
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    Chapter 16 Methods to Purify and Assay Secretory Pathway Kinases
Attention for Chapter 12: Creating Knockouts of Conserved Oligomeric Golgi Complex Subunits Using CRISPR-Mediated Gene Editing Paired with a Selection Strategy Based on Glycosylation Defects Associated with Impaired COG Complex Function
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Chapter title
Creating Knockouts of Conserved Oligomeric Golgi Complex Subunits Using CRISPR-Mediated Gene Editing Paired with a Selection Strategy Based on Glycosylation Defects Associated with Impaired COG Complex Function
Chapter number 12
Book title
The Golgi Complex
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-6463-5_12
Pubmed ID
Book ISBNs
978-1-4939-6461-1, 978-1-4939-6463-5
Authors

Jessica Bailey Blackburn, Vladimir V. Lupashin

Editors

William J. Brown

Abstract

The conserved oligomeric Golgi (COG) complex is a key evolutionally conserved multisubunit protein machinery that regulates tethering and fusion of intra-Golgi transport vesicles. The Golgi apparatus specifically promotes sorting and complex glycosylation of glycoconjugates. Without proper glycosylation and processing, proteins and lipids will be mislocalized and/or have impaired function. The Golgi glycosylation machinery is kept in homeostasis by a careful balance of anterograde and retrograde trafficking to ensure proper localization of the glycosylation enzymes and their substrates. This balance, like other steps of membrane trafficking, is maintained by vesicle trafficking machinery that includes COPI vesicular coat proteins, SNAREs, Rabs, and both coiled-coil and multi-subunit vesicular tethers. The COG complex interacts with other membrane trafficking components and is essential for proper localization of Golgi glycosylation machinery. Here we describe using CRISPR-mediated gene editing coupled with a phenotype-based selection strategy directly linked to the COG complex's role in glycosylation homeostasis to obtain COG complex subunit knockouts (KOs). This has resulted in clonal KOs for each COG subunit in HEK293T cells and gives the ability to further probe the role of the COG complex in Golgi homeostasis.

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X Demographics

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 17 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 17 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 24%
Student > Ph. D. Student 3 18%
Professor 1 6%
Other 1 6%
Student > Master 1 6%
Other 1 6%
Unknown 6 35%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 5 29%
Neuroscience 2 12%
Social Sciences 2 12%
Agricultural and Biological Sciences 1 6%
Unknown 7 41%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 13 September 2016.
All research outputs
#18,471,305
of 22,888,307 outputs
Outputs from Methods in molecular biology
#7,924
of 13,132 outputs
Outputs of similar age
#284,573
of 393,716 outputs
Outputs of similar age from Methods in molecular biology
#845
of 1,471 outputs
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So far Altmetric has tracked 13,132 research outputs from this source. They receive a mean Attention Score of 3.4. This one is in the 24th percentile – i.e., 24% of its peers scored the same or lower than it.
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