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Epitope Mapping Protocols

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Cover of 'Epitope Mapping Protocols'

Table of Contents

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    Book Overview
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    Chapter 1 What Is a B-Cell Epitope?
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    Chapter 2 Structural Basis of Antibody–Antigen Interactions
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    Chapter 3 Epitope Mapping of Antibody–Antigen Complexes by Nuclear Magnetic Resonance Spectroscopy
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    Chapter 4 A Solid-Phase Mutual Inhibition Assay with Labeled Antigen
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    Chapter 5 Epitope Mapping by Surface Plasmon Resonance
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    Chapter 6 Proteolytic Fragmentation for Epitope Mapping
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    Chapter 7 Epitope Mapping by Proteolysis of Antigen–Antibody Complexes
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    Chapter 8 Identifying Residues in Antigenic Determinants by Chemical Modification
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    Chapter 9 Epitope Mapping by Differential Chemical Modification of Antigens
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    Chapter 10 Linear B-Cell Epitope Mapping Using Enzyme-Linked Immunosorbent Assay for Libraries of Overlapping Synthetic Peptides
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    Chapter 11 Antibody epitope mapping using SPOT peptide arrays.
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    Chapter 12 Peptide Microarrays for Profiling of Modification State-Specific Antibodies
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    Chapter 13 Epitope Mapping Using Phage Display Peptide Libraries
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    Chapter 14 Antibody Epitope Mapping Using De Novo Generated Synthetic Peptide Libraries
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    Chapter 15 Antibody Specificity Profiling on Functional Protein Microarrays
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    Chapter 16 Peptide Microarrays for Determination of Cross-Reactivity
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    Chapter 17 Epitope Mapping Using Randomly Generated Peptide Libraries
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    Chapter 18 Probing the Epitope Signatures of IgG Antibodies in Human Serum from Patients with Autoimmune Disease
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    Chapter 19 Microarrayed Allergen Molecules for Diagnostics of Allergy
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    Chapter 20 Monitoring B Cell Response to Immunoselected Phage-Displayed Peptides by Microarrays
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    Chapter 21 Epitope Mapping Using Homolog-Scanning Mutagenesis
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    Chapter 22 Epitope Mapping by Region-Specified PCR-Mutagenesis
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    Chapter 23 Epitope Mapping Using Phage-Display Random Fragment Libraries
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    Chapter 24 Prediction of Linear B-cell Epitopes
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    Chapter 25 Molecular Recognition of Diverse Ligands by T-Cell Receptors
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    Chapter 26 Identification of Human MHC Class I Binding Peptides using the iTOPIA™− Epitope Discovery System
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    Chapter 27 T-Cell Epitope Mapping in Mycobacterium tuberculosis Using PepMixes Created by Micro-Scale SPOT™− Synthesis
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    Chapter 28 High-Throughput T-Cell Epitope Discovery Through MHC Peptide Exchange
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    Chapter 29 T-Cell Epitope Processing (The Epitope Flanking Regions Matter)
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    Chapter 30 Identification of MHC Class II Binding Peptides: Microarray and Soluble MHC Class II Molecules
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    Chapter 31 T-Cell Epitope Mapping
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    Chapter 32 Identification and Validation of T-Cell Epitopes Using the IFN-γ EliSpot Assay
Attention for Chapter 11: Antibody epitope mapping using SPOT peptide arrays.
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Chapter title
Antibody epitope mapping using SPOT peptide arrays.
Chapter number 11
Book title
Epitope Mapping Protocols
Published in
Methods in molecular biology, April 2009
DOI 10.1007/978-1-59745-450-6_11
Pubmed ID
Book ISBNs
978-1-934115-17-6, 978-1-59745-450-6
Authors

Reineke U, Sabat R, Ulrich Reineke, Robert Sabat

Abstract

Information at the amino acid level about the epitopes of proteins recognized by antibodies or antibody fragments is important for their use as biological and diagnostic tools, therapeutic molecules, and for understanding molecular recognition events in general. The use of chemically prepared arrays of short peptides has emerged as a powerful tool to identify and characterize antibody epitopes. In this chapter the SPOT synthesis technique is described in detail. In addition, three different types of peptide libraries and their applications are described: protein sequence-derived scans of overlapping peptides (peptide scans) used to locate epitopes within the protein sequence, truncation libraries used to identify the minimal peptide length required for antibody binding, and complete substitutional analyses to identify the key residues important for antibody binding.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 19 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Ireland 1 5%
Unknown 18 95%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 7 37%
Researcher 3 16%
Other 2 11%
Student > Bachelor 2 11%
Professor > Associate Professor 2 11%
Other 2 11%
Unknown 1 5%
Readers by discipline Count As %
Agricultural and Biological Sciences 8 42%
Biochemistry, Genetics and Molecular Biology 7 37%
Pharmacology, Toxicology and Pharmaceutical Science 1 5%
Veterinary Science and Veterinary Medicine 1 5%
Medicine and Dentistry 1 5%
Other 0 0%
Unknown 1 5%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 May 2012.
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#15,243,549
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Outputs of similar age from Methods in molecular biology
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