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Multiple Sequence Alignment Methods

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Cover of 'Multiple Sequence Alignment Methods'

Table of Contents

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    Book Overview
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    Chapter 1 Dynamic Programming
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    Chapter 2 Heuristic Alignment Methods
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    Chapter 3 Objective Functions
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    Chapter 4 Who watches the watchmen? An appraisal of benchmarks for multiple sequence alignment.
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    Chapter 5 BLAST and FASTA Similarity Searching for Multiple Sequence Alignment
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    Chapter 6 Multiple Sequence Alignment Methods
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    Chapter 7 T-coffee: tree-based consistency objective function for alignment evaluation.
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    Chapter 8 MAFFT: Iterative Refinement and Additional Methods
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    Chapter 9 Multiple Sequence Alignment Methods
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    Chapter 10 Phylogeny-aware alignment with PRANK.
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    Chapter 11 GramAlign: Fast alignment driven by grammar-based phylogeny
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    Chapter 12 Multiple Sequence Alignment with DIALIGN
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    Chapter 13 PicXAA: A Probabilistic Scheme for Finding the Maximum Expected Accuracy Alignment of Multiple Biological Sequences
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    Chapter 14 Multiple Protein Sequence Alignment with MSAProbs
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    Chapter 15 Large-Scale Multiple Sequence Alignment and Tree Estimation Using SATé
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    Chapter 16 PRALINE: A Versatile Multiple Sequence Alignment Toolkit
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    Chapter 17 PROMALS3D: Multiple Protein Sequence Alignment Enhanced with Evolutionary and Three-Dimensional Structural Information
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    Chapter 18 MSACompro: Improving Multiple Protein Sequence Alignment by Predicted Structural Features
Attention for Chapter 14: Multiple Protein Sequence Alignment with MSAProbs
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Chapter title
Multiple Protein Sequence Alignment with MSAProbs
Chapter number 14
Book title
Multiple Sequence Alignment Methods
Published in
Methods in molecular biology, August 2013
DOI 10.1007/978-1-62703-646-7_14
Pubmed ID
Book ISBNs
978-1-62703-645-0, 978-1-62703-646-7
Authors

Yongchao Liu, Bertil Schmidt, Liu, Yongchao, Schmidt, Bertil

Editors

David J Russell

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 9 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Ecuador 1 11%
Brazil 1 11%
Unknown 7 78%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 3 33%
Professor > Associate Professor 2 22%
Student > Bachelor 1 11%
Researcher 1 11%
Student > Postgraduate 1 11%
Other 0 0%
Unknown 1 11%
Readers by discipline Count As %
Computer Science 3 33%
Agricultural and Biological Sciences 3 33%
Biochemistry, Genetics and Molecular Biology 1 11%
Chemistry 1 11%
Unknown 1 11%