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Histone Variants

Overview of attention for book
Cover of 'Histone Variants'

Table of Contents

  1. Altmetric Badge
    Book Overview
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    Chapter 1 Methods for Preparing Nucleosomes Containing Histone Variants
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    Chapter 2 Characterization of Posttranslational Modifications on Histone Variants
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    Chapter 3 Purification of Histone Variant-Interacting Chaperone Complexes
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    Chapter 4 Detection of Histone Modification Dynamics during the Cell Cycle by MS-Based Proteomics
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    Chapter 5 Histone Native Chromatin Immunoprecipitation
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    Chapter 6 How to Tackle Challenging ChIP-Seq, with Long-Range Cross-Linking, Using ATRX as an Example
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    Chapter 7 time-ChIP: A Method to Determine Long-Term Locus-Specific Nucleosome Inheritance
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    Chapter 8 MINCE-Seq: Mapping In Vivo Nascent Chromatin with EdU and Sequencing
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    Chapter 9 RChIP-Seq: Chromatin-Associated RNA Sequencing in Developmentally Staged Mouse Testes
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    Chapter 10 Bioinformatic Analysis of Nucleosome and Histone Variant Positioning
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    Chapter 11 Imaging Newly Synthesized and Old Histone Variant Dynamics Dependent on Chaperones Using the SNAP-Tag System
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    Chapter 12 Real-Time De Novo Deposition of Centromeric Histone-Associated Proteins Using the Auxin-Inducible Degradation System
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    Chapter 13 Live Imaging of Parental Histone Variant Dynamics in UVC-Damaged Chromatin
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    Chapter 14 CRISPR/Cas9 Gene Editing of Human Histone H2A Variant H2AX and MacroH2A
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    Chapter 15 Studying the Evolution of Histone Variants Using Phylogeny
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    Chapter 16 Characterization of Post-Meiotic Male Germ Cell Genome Organizational States
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    Chapter 17 An Animal Model for Genetic Analysis of Multi-Gene Families: Cloning and Transgenesis of Large Tandemly Repeated Histone Gene Clusters
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    Chapter 18 Imaging and Quantitation of Assembly Dynamics of the Centromeric Histone H3 Variant CENP-A in Drosophila melanogaster Spermatocytes by Immunofluorescence and Fluorescence In-Situ Hybridization (Immuno-FISH)
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    Chapter 19 Probing the Function of Oncohistones Using Mutant Transgenes and Knock-In Mutations
Attention for Chapter 15: Studying the Evolution of Histone Variants Using Phylogeny
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Chapter title
Studying the Evolution of Histone Variants Using Phylogeny
Chapter number 15
Book title
Histone Variants
Published in
Methods in molecular biology, August 2018
DOI 10.1007/978-1-4939-8663-7_15
Pubmed ID
30073533
Book ISBNs
978-1-4939-8662-0, 978-1-4939-8663-7
Authors

Antoine Molaro, Ines A. Drinnenberg, Molaro, Antoine, Drinnenberg, Ines A.

Abstract

Histones wrap DNA to form nucleosomes that package eukaryotic genomes. Histone variants have evolved for diverse functions including gene expression, DNA repair, epigenetic silencing, and chromosome segregation. With the rapid increase of newly sequenced genomes the repertoire of histone variants expands, demonstrating a great diversification of these proteins across eukaryotes. In this chapter, we are providing guidelines for the computational characterization and annotation of histone variants. We describe methods to predict the characteristic histone fold domain and list features specific to known histone variants that can be used to categorize newly identified histone fold proteins. We continue describing procedures to retrieve additional related histone variants for comparative sequence analyses and phylogenetic reconstructions to refine the annotation and to determine the evolutionary trajectories of the variant in question.

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X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
 Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 14 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 14 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 3 21%
Researcher 3 21%
Student > Master 2 14%
Unspecified 1 7%
Unknown 5 36%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 5 36%
Agricultural and Biological Sciences 3 21%
Unspecified 1 7%
Unknown 5 36%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 04 August 2018.
All research outputs
#20,529,173
of 23,098,660 outputs
Outputs from Methods in molecular biology
#9,977
of 13,208 outputs
Outputs of similar age
#288,846
of 331,034 outputs
Outputs of similar age from Methods in molecular biology
#156
of 193 outputs
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So far Altmetric has tracked 13,208 research outputs from this source. They receive a mean Attention Score of 3.4. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 193 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.

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