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Membrane Trafficking

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Cover of 'Membrane Trafficking'

Table of Contents

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    Book Overview
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    Chapter 1 Intracellular Parcel Service: Current Issues in Intracellular Membrane Trafficking
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    Chapter 2 In vitro analysis of the mitochondrial preprotein import machinery using recombinant precursor polypeptides.
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    Chapter 3 Import of proteins into isolated yeast mitochondria.
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    Chapter 4 Evaluation of Unconventional Protein Secretion in Saccharomyces cerevisiae.
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    Chapter 5 Fractionation of Plasmodium-infected human red blood cells to study protein trafficking.
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    Chapter 6 Investigating Signaling Processes in Membrane Trafficking
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    Chapter 7 Recruitment of Coat Proteins to Liposomes and Peptidoliposomes
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    Chapter 8 A β-Lactamase Based Assay to Measure Surface Expression of Membrane Proteins
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    Chapter 9 Cell-Free Reconstitution of Multivesicular Body (MVB) Cargo Sorting.
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    Chapter 10 Analysis of Biogenesis of Lipid Droplets by Examining Rab40c Associating with Lipid Droplets
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    Chapter 11 Analysis of Conventional and Unconventional Trafficking of CFTR and Other Membrane Proteins
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    Chapter 12 Assessing Mammalian autophagy.
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    Chapter 13 Expression of Functional Myc-Tagged Conserved Oligomeric Golgi (COG) Subcomplexes in Mammalian Cells
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    Chapter 14 Molecular and Cellular Characterization of GCC185: A Tethering Protein of the Trans-Golgi Network.
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    Chapter 15 Visualizing toll-like receptor-dependent phagosomal dynamics in murine dendritic cells using live cell microscopy.
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    Chapter 16 Understanding of Complex Protein Interactions with Respect to Anchorage Independence
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    Chapter 17 Application of flow cytometry to analyze intracellular location and trafficking of cargo in cell populations.
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    Chapter 18 Approaches to Analyze the Role of Rab GTPases in Endocytic Trafficking of Epidermal Growth Factor Receptor (EGFR)
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    Chapter 19 Does Super-Resolution Fluorescence Microscopy Obsolete Previous Microscopic Approaches to Protein Co-localization?
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    Chapter 20 Bimolecular Fluorescence Complementation (BiFC) Technique in Yeast Saccharomyces cerevisiae and Mammalian Cells.
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    Chapter 21 Microscopic and spectroscopic techniques to investigate lipid droplet formation and turnover in yeast.
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    Chapter 22 Image-Based Identification of Nuclear Export Inhibitors from Natural Products
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    Chapter 23 Correlative Video-Light–Electron Microscopy of Mobile Organelles
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    Chapter 24 Live cell imaging of endosomal trafficking in fungi.
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    Chapter 25 Quantitative Analysis of Transferrin Cycling by Automated Fluorescence Microscopy
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    Chapter 26 Identification of Factors Regulating MET Receptor Endocytosis by High-Throughput siRNA Screening
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    Chapter 27 Large-scale analysis of membrane transport in yeast using invertase reporters.
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    Chapter 28 RNAi Screens for Genes Involved in Golgi Glycosylation
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    Chapter 29 Proteomic Analyses of a Bi-Lobed Structure in Trypanosoma brucei
  31. Altmetric Badge
    Chapter 30 Application of the proximity-dependent assay and fluorescence imaging approaches to study viral entry pathways.
Attention for Chapter 19: Does Super-Resolution Fluorescence Microscopy Obsolete Previous Microscopic Approaches to Protein Co-localization?
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Chapter title
Does Super-Resolution Fluorescence Microscopy Obsolete Previous Microscopic Approaches to Protein Co-localization?
Chapter number 19
Book title
Membrane Trafficking
Published in
Methods in molecular biology, January 2015
DOI 10.1007/978-1-4939-2309-0_19
Pubmed ID
Book ISBNs
978-1-4939-2308-3, 978-1-4939-2309-0
Authors

Laura MacDonald, Giulia Baldini, Brian Storrie, MacDonald, Laura, Baldini, Giulia, Storrie, Brian

Abstract

Conventional microscopy techniques, namely, the confocal microscope or deconvolution processes, are resolution limited to approximately 200-250 nm by the diffraction properties of light as developed by Ernst Abbe in 1873. This diffraction limit is appreciably above the size of most multi-protein complexes, which are typically 20-50 nm in diameter. In the mid-2000s, biophysicists moved beyond the diffraction barrier by structuring the illumination pattern and then applying mathematical principles and algorithms to allow a resolution of approximately 100 nm, sufficient to address protein subcellular co-localization questions. This "breaking" of the diffraction barrier, affording resolution beyond 200 nm, is termed super-resolution microscopy. More recent approaches include single-molecule localization (such as photoactivated localization microscopy (PALM)/stochastic optical reconstruction microscopy (STORM)) and point spread function engineering (such as stimulated emission depletion (STED) microscopy). In this review, we explain basic principles behind currently commercialized super-resolution setups and address advantages and considerations in applying these techniques to protein co-localization in biological systems.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 99 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 1 1%
Belgium 1 1%
Unknown 97 98%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 25 25%
Researcher 15 15%
Student > Bachelor 15 15%
Student > Master 10 10%
Student > Doctoral Student 9 9%
Other 6 6%
Unknown 19 19%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 24 24%
Agricultural and Biological Sciences 16 16%
Chemistry 13 13%
Physics and Astronomy 8 8%
Engineering 4 4%
Other 12 12%
Unknown 22 22%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 16 March 2015.
All research outputs
#20,262,276
of 22,792,160 outputs
Outputs from Methods in molecular biology
#9,898
of 13,110 outputs
Outputs of similar age
#295,733
of 353,009 outputs
Outputs of similar age from Methods in molecular biology
#635
of 996 outputs
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So far Altmetric has tracked 13,110 research outputs from this source. They receive a mean Attention Score of 3.3. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 996 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.