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Advanced Fluorescence Microscopy

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Attention for Chapter 15: Optogenetics: optical control of a photoactivatable rac in living cells.
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Chapter title
Optogenetics: optical control of a photoactivatable rac in living cells.
Chapter number 15
Book title
Advanced Fluorescence Microscopy
Published in
Methods in molecular biology, October 2014
DOI 10.1007/978-1-4939-2080-8_15
Pubmed ID
Book ISBNs
978-1-4939-2079-2, 978-1-4939-2080-8
Authors

Yin T, Wu YI, Taofei Yin, Yi I. Wu

Editors

Peter J. Verveer

Abstract

Recent developments in optogenetics have extended optical control of signaling to intracellular proteins, including Rac, a small G protein in the Rho family. A blue light-sensing LOV (light, oxygen, or voltage) domain derived from Avena sativa (oat) phototropin was fused to the N-terminus of a constitutively active mutant of Rac, via an α-helix (Jα) that is conserved among plant phototropins. The fused LOV domain occluded binding of downstream effectors to Rac in the dark. Exposure to blue light caused a conformational change of the LOV domain and unwinding of the Jα helix, relieving steric inhibition. The LOV domain incorporates a flavin as the photon-absorbing cofactor and can be activated by light in a reversible and repeatable fashion. In cultured cells, global illumination with blue light rapidly activated Rac and led to cell spreading and membrane ruffling. Localized and pulsed illumination generated a gradient of Rac activity and induced directional migration. In this chapter, we will describe the techniques in detail and present some examples of applications of using photoactivatable Rac (PA-Rac) in living cells.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 18 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 18 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 22%
Student > Ph. D. Student 4 22%
Student > Doctoral Student 2 11%
Student > Bachelor 2 11%
Student > Master 2 11%
Other 2 11%
Unknown 2 11%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 6 33%
Agricultural and Biological Sciences 4 22%
Nursing and Health Professions 2 11%
Psychology 1 6%
Physics and Astronomy 1 6%
Other 2 11%
Unknown 2 11%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 17 April 2017.
All research outputs
#17,731,702
of 22,770,070 outputs
Outputs from Methods in molecular biology
#7,185
of 13,090 outputs
Outputs of similar age
#175,551
of 260,458 outputs
Outputs of similar age from Methods in molecular biology
#48
of 133 outputs
Altmetric has tracked 22,770,070 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,090 research outputs from this source. They receive a mean Attention Score of 3.3. This one is in the 39th percentile – i.e., 39% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 260,458 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 28th percentile – i.e., 28% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 133 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 51% of its contemporaries.