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Computational Methods in Systems Biology

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Cover of 'Computational Methods in Systems Biology'

Table of Contents

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    Book Overview
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    Chapter 1 Differential and Integral Views of Gene-Phenotype Relations: A Systems Biological Insight
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    Chapter 2 Resolving the Three-Dimensional Histology of the Heart
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    Chapter 3 Bimodal Protein Distributions in Heterogeneous Oscillating Systems
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    Chapter 4 Expressive Statistical Model Checking of Genetic Networks with Delayed Stochastic Dynamics
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    Chapter 5 Symmetry-Based Model Reduction for Approximate Stochastic Analysis
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    Chapter 6 Detection of Multi-clustered Genes and Community Structure for the Plant Pathogenic Fungus Fusarium graminearum
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    Chapter 7 Predicting Phenotype from Genotype through Automatically Composed Petri Nets
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    Chapter 8 A Simple Model to Control Growth Rate of Synthetic E. coli during the Exponential Phase: Model Analysis and Parameter Estimation
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    Chapter 9 Computational Methods in Systems Biology
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    Chapter 10 Analysis of Modular Organisation of Interaction Networks Based on Asymptotic Dynamics
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    Chapter 11 Concretizing the Process Hitting into Biological Regulatory Networks
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    Chapter 12 Abstraction of Graph-Based Models of Bio-molecular Reaction Systems for Efficient Simulation
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    Chapter 13 Parameter Identification and Model Ranking of Thomas Networks
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    Chapter 14 Computational Methods in Systems Biology
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    Chapter 15 Population Dynamics P Systems on CUDA
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    Chapter 16 Approximate Bisimulations for Sodium Channel Dynamics
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    Chapter 17 Efficient Handling of Large Signalling-Regulatory Networks by Focusing on Their Core Control
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    Chapter 18 Sequence Dependent Properties of the Expression Dynamics of Genes and Gene Networks
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    Chapter 19 Simulating Insulin Infusion Pump Risks by In-Silico Modeling of the Insulin-Glucose Regulatory System
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    Chapter 20 Revisiting the Training of Logic Models of Protein Signaling Networks with a Formal Approach based on Answer Set Programming
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    Chapter 21 JAK-STAT Signalling as Example for a Database-Supported Modular Modelling Concept
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    Chapter 22 ManyCell: A Multiscale Simulator for Cellular Systems
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    Chapter 23 Inferring Reaction Models from ODEs
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    Chapter 24 Modelling Trafficking of Proteins within the Mammalian Cell Using Bio-PEPA
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    Chapter 25 Models of Tet-On System with Epigenetic Effects
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    Chapter 26 GeneFuncster: A Web Tool for Gene Functional Enrichment Analysis and Visualisation
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    Chapter 27 Effects of Molecular Noise on the Multistability in a Synthetic Genetic Oscillator
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    Chapter 28 Computational Methods in Systems Biology
Attention for Chapter 18: Sequence Dependent Properties of the Expression Dynamics of Genes and Gene Networks
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Chapter title
Sequence Dependent Properties of the Expression Dynamics of Genes and Gene Networks
Chapter number 18
Book title
Computational Methods in Systems Biology
Published by
Springer, Berlin, Heidelberg, January 2012
DOI 10.1007/978-3-642-33636-2_18
Book ISBNs
978-3-64-233635-5, 978-3-64-233636-2
Authors

Ilya Potapov, Jarno Mäkelä, Olli Yli-Harja, Andre Ribeiro

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 2 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 2 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 1 50%
Unknown 1 50%
Readers by discipline Count As %
Agricultural and Biological Sciences 1 50%
Unknown 1 50%