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Proteomics for Biomarker Discovery

Overview of attention for book
Cover of 'Proteomics for Biomarker Discovery'

Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 Affinity Depletion of Plasma and Serum for Mass Spectrometry-Based Proteome Analysis
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    Chapter 2 Tissue Sample Preparation for Biomarker Discovery
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    Chapter 3 Subcellular Fractionation for Identification of Biomarkers: Serial Detergent Extraction by Subcellular Accessibility and Solubility
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    Chapter 4 Analysis of Secreted Proteins
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    Chapter 5 Preparation of Human Cerebrospinal Fluid for Proteomics Biomarker Analysis
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    Chapter 6 Proteomic Analysis of Frozen Tissue Samples Using Laser Capture Microdissection
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    Chapter 7 Use of Formalin-Fixed, Paraffin-Embedded Tissue for Proteomic Biomarker Discovery
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    Chapter 8 Phosphopeptide Enrichment Using Offline Titanium Dioxide Columns for Phosphoproteomics
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    Chapter 9 iTRAQ-Labeling for Biomarker Discovery
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    Chapter 10 Analysis of glycoproteins for biomarker discovery.
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    Chapter 11 SILAC in Biomarker Discovery
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    Chapter 12 Trypsin-Mediated 18 O/ 16 O Labeling for Biomarker Discovery
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    Chapter 13 Two-Dimensional SDS-PAGE Fractionation of Biological Samples for Biomarker Discovery
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    Chapter 14 Informatics of Protein and Posttranslational Modification Detection via Shotgun Proteomics.
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    Chapter 15 Quantitation of Met Tyrosine Phosphorylation Using MRM-MS
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    Chapter 16 Preparation of Human Serum for Prolactin Measurement by Multiple Reaction Monitoring Mass Spectrometry
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    Chapter 17 Label-Free Quantitative Shotgun Proteomics Using Normalized Spectral Abundance Factors
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    Chapter 18 Employment of Complementary Dissociation Techniques for Body Fluid Characterization and Biomarker Discovery
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    Chapter 19 Phosphopeptide Microarrays for Comparative Proteomic Profiling of Cellular Lysates
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    Chapter 20 Tissue Preparation for MALDI-MS Imaging of Protein and Peptides
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    Chapter 21 Plant Proteogenomics: From Protein Extraction to Improved Gene Predictions
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    Chapter 22 Label-Free Differential Analysis of Murine Postsynaptic Densities
  24. Altmetric Badge
    Chapter 23 Fractionation of Peptides by Strong Cation-Exchange Liquid Chromatography
  25. Altmetric Badge
    Chapter 24 Erratum Chapter 22 Label-Free Differential Analysis of Murine Postsynaptic Densities
Attention for Chapter 1: Affinity Depletion of Plasma and Serum for Mass Spectrometry-Based Proteome Analysis
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Chapter title
Affinity Depletion of Plasma and Serum for Mass Spectrometry-Based Proteome Analysis
Chapter number 1
Book title
Proteomics for Biomarker Discovery
Published in
Methods in molecular biology, March 2013
DOI 10.1007/978-1-62703-360-2_1
Pubmed ID
Book ISBNs
978-1-62703-359-6, 978-1-62703-360-2
Authors

Julian A. J. Jaros, Paul C. Guest, Sabine Bahn, Daniel Martins-de-Souza, Jaros JA, Guest PC, Bahn S, Martins-de-Souza D, Jaros, Julian A. J., Guest, Paul C., Bahn, Sabine, Martins-de-Souza, Daniel

Abstract

Protein biomarker discovery in blood plasma and serum is severely hampered by the vast dynamic range of the proteome. With protein concentrations spanning 12 orders of magnitude, conventional mass spectrometric analysis allows for detection of only a few low-abundance proteins. Prior depletion of high-abundant proteins from the sample can increase analytical depth considerably and has become a widely used practice. We describe in detail an affinity depletion method that selectively removes 14 of the most abundant proteins in plasma and serum.

X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 50 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Switzerland 2 4%
United Kingdom 1 2%
Unknown 47 94%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 10 20%
Researcher 10 20%
Student > Master 8 16%
Student > Bachelor 4 8%
Other 2 4%
Other 2 4%
Unknown 14 28%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 9 18%
Agricultural and Biological Sciences 9 18%
Medicine and Dentistry 5 10%
Pharmacology, Toxicology and Pharmaceutical Science 4 8%
Chemistry 3 6%
Other 6 12%
Unknown 14 28%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 December 2013.
All research outputs
#18,357,514
of 22,736,112 outputs
Outputs from Methods in molecular biology
#7,854
of 13,086 outputs
Outputs of similar age
#148,658
of 195,275 outputs
Outputs of similar age from Methods in molecular biology
#19
of 32 outputs
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