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Viral Metagenomics

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Attention for Chapter: Distribution of Small RNAs Along Transposable Elements in Vitis vinifera During Somatic Embryogenesis.
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Chapter title
Distribution of Small RNAs Along Transposable Elements in Vitis vinifera During Somatic Embryogenesis.
Book title
Viral Metagenomics
Published in
Methods in molecular biology, January 2024
DOI 10.1007/978-1-0716-3515-5_19
Pubmed ID
Book ISBNs
978-1-07-163514-8, 978-1-07-163515-5
Authors

Rotunno, Silvia, Leonetti, Paola, Szittya, György, Pantaleo, Vitantonio

Abstract

Metaviridae is a family of reverse-transcribing viruses, closely related to retroviruses; they exist within their host's DNA as transposable elements. Transposable element study requires the use of specialized tools, in part because of their repetitive nature. By combining data from transcript RNA-Seq, small RNA-Seq, and parallel analysis of RNA ends-Seq from grapevine somatic embryos, we set up a bioinformatics flowchart that could be able to assemble and identify transposable elements.

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Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 07 December 2023.
All research outputs
#16,979,510
of 24,958,301 outputs
Outputs from Methods in molecular biology
#5,847
of 14,012 outputs
Outputs of similar age
#39,968
of 80,934 outputs
Outputs of similar age from Methods in molecular biology
#38
of 129 outputs
Altmetric has tracked 24,958,301 research outputs across all sources so far. This one is in the 21st percentile – i.e., 21% of other outputs scored the same or lower than it.
So far Altmetric has tracked 14,012 research outputs from this source. They receive a mean Attention Score of 3.5. This one is in the 42nd percentile – i.e., 42% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 80,934 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 36th percentile – i.e., 36% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 129 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 51% of its contemporaries.