↓ Skip to main content

Algorithms in Bioinformatics

Overview of attention for book
Cover of 'Algorithms in Bioinformatics'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Preserving Inversion Phylogeny Reconstruction
  3. Altmetric Badge
    Chapter 2 Fast Phylogenetic Tree Reconstruction Using Locality-Sensitive Hashing
  4. Altmetric Badge
    Chapter 3 Efficient Computation of Popular Phylogenetic Tree Measures
  5. Altmetric Badge
    Chapter 4 SibJoin: A Fast Heuristic for Half-Sibling Reconstruction
  6. Altmetric Badge
    Chapter 5 Reconstructing the Evolution of Molecular Interaction Networks under the DMC and Link Dynamics Models
  7. Altmetric Badge
    Chapter 6 Estimating Population Size via Line Graph Reconstruction
  8. Altmetric Badge
    Chapter 7 Extracting Conflict-Free Information from Multi-labeled Trees
  9. Altmetric Badge
    Chapter 8 Reducing Problems in Unrooted Tree Compatibility to Restricted Triangulations of Intersection Graphs
  10. Altmetric Badge
    Chapter 9 An Optimal Reconciliation Algorithm for Gene Trees with Polytomies
  11. Altmetric Badge
    Chapter 10 Accounting for Gene Tree Uncertainties Improves Gene Trees and Reconciliation Inference
  12. Altmetric Badge
    Chapter 11 RNA Tree Comparisons via Unrooted Unordered Alignments
  13. Altmetric Badge
    Chapter 12 Tree Decomposition and Parameterized Algorithms for RNA Structure-Sequence Alignment Including Tertiary Interactions and Pseudoknots
  14. Altmetric Badge
    Chapter 13 δ-TRIMAX: Extracting Triclusters and Analysing Coregulation in Time Series Gene Expression Data
  15. Altmetric Badge
    Chapter 14 CLIIQ: Accurate Comparative Detection and Quantification of Expressed Isoforms in a Population
  16. Altmetric Badge
    Chapter 15 Improved Lower Bounds on the Compatibility of Quartets, Triplets, and Multi-state Characters
  17. Altmetric Badge
    Chapter 16 Succinct Multibit Tree: Compact Representation of Multibit Trees by Using Succinct Data Structures in Chemical Fingerprint Searches
  18. Altmetric Badge
    Chapter 17 Comparing DNA sequence collections by direct comparison of compressed text indexes
  19. Altmetric Badge
    Chapter 18 Succinct de Bruijn Graphs
  20. Altmetric Badge
    Chapter 19 Space-Efficient and Exact de Bruijn Graph Representation Based on a Bloom Filter
  21. Altmetric Badge
    Chapter 20 From de Bruijn Graphs to Rectangle Graphs for Genome Assembly
  22. Altmetric Badge
    Chapter 21 MORPH-PRO: A Novel Algorithm and Web Server for Protein Morphing
  23. Altmetric Badge
    Chapter 22 How Accurately Can We Model Protein Structures with Dihedral Angles?
  24. Altmetric Badge
    Chapter 23 Resolving Spatial Inconsistencies in Chromosome Conformation Data
  25. Altmetric Badge
    Chapter 24 MS-DPR: An Algorithm for Computing Statistical Significance of Spectral Identifications of Non-linear Peptides
  26. Altmetric Badge
    Chapter 25 FinIS: Improved in silico Finishing Using an Exact Quadratic Programming Formulation
  27. Altmetric Badge
    Chapter 26 Lightweight LCP Construction for Next-Generation Sequencing Datasets
  28. Altmetric Badge
    Chapter 27 Sign Assignment Problems on Protein Networks
  29. Altmetric Badge
    Chapter 28 Sparse Learning Based Linear Coherent Bi-clustering
  30. Altmetric Badge
    Chapter 29 A Simplified View of DCJ-Indel Distance
  31. Altmetric Badge
    Chapter 30 DCJ-indel Distance with Distinct Operation Costs
  32. Altmetric Badge
    Chapter 31 Hidden Breakpoints in Genome Alignments
  33. Altmetric Badge
    Chapter 32 A Probabilistic Approach to Accurate Abundance-Based Binning of Metagenomic Reads
  34. Altmetric Badge
    Chapter 33 Tandem Halving Problems by DCJ
  35. Altmetric Badge
    Chapter 34 A Practical Approximation Algorithm for Solving Massive Instances of Hybridization Number
  36. Altmetric Badge
    Chapter 35 Distributed String Mining for High-Throughput Sequencing Data
Attention for Chapter 26: Lightweight LCP Construction for Next-Generation Sequencing Datasets
Altmetric Badge

Mentioned by

twitter
3 X users

Citations

dimensions_citation
3 Dimensions

Readers on

mendeley
14 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Chapter title
Lightweight LCP Construction for Next-Generation Sequencing Datasets
Chapter number 26
Book title
Algorithms in Bioinformatics
Published in
Lecture notes in computer science, January 2012
DOI 10.1007/978-3-642-33122-0_26
Book ISBNs
978-3-64-233121-3, 978-3-64-233122-0
Authors

Markus J. Bauer, Anthony J. Cox, Giovanna Rosone, Marinella Sciortino

Editors

Ben Raphael, Jijun Tang

X Demographics

X Demographics

The data shown below were collected from the profiles of 3 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 14 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 7%
Brazil 1 7%
Unknown 12 86%

Demographic breakdown

Readers by professional status Count As %
Researcher 5 36%
Student > Ph. D. Student 3 21%
Student > Doctoral Student 2 14%
Professor 1 7%
Other 1 7%
Other 2 14%
Readers by discipline Count As %
Computer Science 9 64%
Biochemistry, Genetics and Molecular Biology 1 7%
Agricultural and Biological Sciences 1 7%
Medicine and Dentistry 1 7%
Unknown 2 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 10 May 2013.
All research outputs
#15,270,698
of 22,708,120 outputs
Outputs from Lecture notes in computer science
#4,645
of 8,122 outputs
Outputs of similar age
#163,247
of 244,149 outputs
Outputs of similar age from Lecture notes in computer science
#268
of 490 outputs
Altmetric has tracked 22,708,120 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 8,122 research outputs from this source. They receive a mean Attention Score of 5.0. This one is in the 27th percentile – i.e., 27% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 244,149 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 21st percentile – i.e., 21% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 490 others from the same source and published within six weeks on either side of this one. This one is in the 22nd percentile – i.e., 22% of its contemporaries scored the same or lower than it.