↓ Skip to main content

The Gene Ontology Handbook

Overview of attention for book
Cover of 'The Gene Ontology Handbook'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Primer on Ontologies
  3. Altmetric Badge
    Chapter 2 The Gene Ontology and the Meaning of Biological Function
  4. Altmetric Badge
    Chapter 3 Primer on the Gene Ontology
  5. Altmetric Badge
    Chapter 4 Best Practices in Manual Annotation with the Gene Ontology
  6. Altmetric Badge
    Chapter 5 Computational Methods for Annotation Transfers from Sequence
  7. Altmetric Badge
    Chapter 6 Text Mining to Support Gene Ontology Curation and Vice Versa
  8. Altmetric Badge
    Chapter 7 How Does the Scientific Community Contribute to Gene Ontology?
  9. Altmetric Badge
    Chapter 8 Evaluating Computational Gene Ontology Annotations
  10. Altmetric Badge
    Chapter 9 Evaluating Functional Annotations of Enzymes Using the Gene Ontology
  11. Altmetric Badge
    Chapter 10 Community-Wide Evaluation of Computational Function Prediction
  12. Altmetric Badge
    Chapter 11 Get GO! Retrieving GO Data Using AmiGO, QuickGO, API, Files, and Tools
  13. Altmetric Badge
    Chapter 12 Semantic Similarity in the Gene Ontology
  14. Altmetric Badge
    Chapter 13 Gene-Category Analysis
  15. Altmetric Badge
    Chapter 14 Gene Ontology: Pitfalls, Biases, and Remedies
  16. Altmetric Badge
    Chapter 15 Visualizing GO Annotations
  17. Altmetric Badge
    Chapter 16 A Gene Ontology Tutorial in Python
  18. Altmetric Badge
    Chapter 17 Annotation Extensions
  19. Altmetric Badge
    Chapter 18 The Evidence and Conclusion Ontology (ECO): Supporting GO Annotations
  20. Altmetric Badge
    Chapter 19 Complementary Sources of Protein Functional Information: The Far Side of GO
  21. Altmetric Badge
    Chapter 20 Integrating Bio-ontologies and Controlled Clinical Terminologies: From Base Pairs to Bedside Phenotypes
  22. Altmetric Badge
    Chapter 21 The Vision and Challenges of the Gene Ontology
Attention for Chapter 19: Complementary Sources of Protein Functional Information: The Far Side of GO
Altmetric Badge

About this Attention Score

  • Good Attention Score compared to outputs of the same age (74th percentile)
  • High Attention Score compared to outputs of the same age and source (83rd percentile)

Mentioned by

twitter
7 X users

Readers on

mendeley
9 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Chapter title
Complementary Sources of Protein Functional Information: The Far Side of GO
Chapter number 19
Book title
The Gene Ontology Handbook
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-3743-1_19
Pubmed ID
Book ISBNs
978-1-4939-3741-7, 978-1-4939-3743-1
Authors

Nicholas Furnham, Furnham, N

Editors

Christophe Dessimoz, Nives Škunca

Abstract

The GO captures many aspects of functional annotations, but there are other alternative complementary sources of protein function information. For example, enzyme functional annotations are described in a range of resources from the Enzyme Commission (E.C.) hierarchical classification to the Kyoto Encyclopedia of Genes and Genomes (KEGG) to the Catalytic Site Atlas amongst many others. This chapter describes some of the main resources available and how they can be used in conjunction with GO.

X Demographics

X Demographics

The data shown below were collected from the profiles of 7 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 9 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Mexico 1 11%
Unknown 8 89%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 22%
Professor > Associate Professor 1 11%
Student > Ph. D. Student 1 11%
Unknown 5 56%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 22%
Biochemistry, Genetics and Molecular Biology 1 11%
Mathematics 1 11%
Unknown 5 56%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 6. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 December 2017.
All research outputs
#5,862,589
of 23,306,612 outputs
Outputs from Methods in molecular biology
#1,639
of 13,326 outputs
Outputs of similar age
#107,125
of 422,802 outputs
Outputs of similar age from Methods in molecular biology
#182
of 1,076 outputs
Altmetric has tracked 23,306,612 research outputs across all sources so far. This one has received more attention than most of these and is in the 74th percentile.
So far Altmetric has tracked 13,326 research outputs from this source. They receive a mean Attention Score of 3.4. This one has done well, scoring higher than 87% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 422,802 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 74% of its contemporaries.
We're also able to compare this research output to 1,076 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 83% of its contemporaries.