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Algorithms in Bioinformatics

Overview of attention for book
Cover of 'Algorithms in Bioinformatics'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Optimal Computation of Avoided Words
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    Chapter 2 A Biclique Approach to Reference Anchored Gene Blocks and Its Applications to Pathogenicity Islands
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    Chapter 3 An Efficient Branch and Cut Algorithm to Find Frequently Mutated Subnetworks in Cancer
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    Chapter 4 Isometric Gene Tree Reconciliation Revisited
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    Chapter 5 Further Improvement in Approximating the Maximum Duo-Preservation String Mapping Problem
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    Chapter 6 SpecTrees: An Efficient Without a Priori Data Structure for MS/MS Spectra Identification
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    Chapter 7 Predicting Core Columns of Protein Multiple Sequence Alignments for Improved Parameter Advising
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    Chapter 8 Fast Compatibility Testing for Phylogenies with Nested Taxa
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    Chapter 9 The Gene Family-Free Median of Three
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    Chapter 10 Correction of Weighted Orthology and Paralogy Relations - Complexity and Algorithmic Results
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    Chapter 11 Copy-Number Evolution Problems: Complexity and Algorithms
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    Chapter 12 Gerbil: A Fast and Memory-Efficient k-mer Counter with GPU-Support
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    Chapter 13 Genome Rearrangements on Both Gene Order and Intergenic Regions
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    Chapter 14 Better Identification of Repeats in Metagenomic Scaffolding
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    Chapter 15 A Better Scoring Model for De Novo Peptide Sequencing: The Symmetric Difference Between Explained and Measured Masses
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    Chapter 16 StreAM- \(T_g\) : Algorithms for Analyzing Coarse Grained RNA Dynamics Based on Markov Models of Connectivity-Graphs
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    Chapter 17 Solving Generalized Maximum-Weight Connected Subgraph Problem for Network Enrichment Analysis
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    Chapter 18 A Natural Encoding of Genetic Variation in a Burrows-Wheeler Transform to Enable Mapping and Genome Inference
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    Chapter 19 Inferring Population Genetic Parameters: Particle Filtering, HMM, Ripley’s K-Function or Runs of Homozygosity?
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    Chapter 20 A Graph Extension of the Positional Burrows-Wheeler Transform and Its Applications
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    Chapter 21 Compact Universal k-mer Hitting Sets
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    Chapter 22 A New Approximation Algorithm for Unsigned Translocation Sorting
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    Chapter 23 Independent Component Analysis to Remove Batch Effects from Merged Microarray Datasets
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    Chapter 24 A Linear Time Approximation Algorithm for the DCJ Distance for Genomes with Bounded Number of Duplicates
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    Chapter 25 A Hybrid Parameter Estimation Algorithm for Beta Mixtures and Applications to Methylation State Classification
Attention for Chapter 14: Better Identification of Repeats in Metagenomic Scaffolding
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (81st percentile)
  • High Attention Score compared to outputs of the same age and source (91st percentile)

Mentioned by

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Chapter title
Better Identification of Repeats in Metagenomic Scaffolding
Chapter number 14
Book title
Algorithms in Bioinformatics
Published in
Lecture notes in computer science, August 2016
DOI 10.1007/978-3-319-43681-4_14
Book ISBNs
978-3-31-943680-7, 978-3-31-943681-4
Authors

Jay Ghurye, Mihai Pop, Ghurye, Jay, Pop, Mihai

Editors

Martin Frith, Christian Nørgaard Storm Pedersen

X Demographics

X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 5 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Japan 1 20%
United States 1 20%
Unknown 3 60%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 40%
Student > Bachelor 1 20%
Researcher 1 20%
Other 1 20%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 40%
Biochemistry, Genetics and Molecular Biology 1 20%
Computer Science 1 20%
Social Sciences 1 20%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 9. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 August 2016.
All research outputs
#4,100,361
of 24,885,505 outputs
Outputs from Lecture notes in computer science
#879
of 8,149 outputs
Outputs of similar age
#70,698
of 375,761 outputs
Outputs of similar age from Lecture notes in computer science
#39
of 471 outputs
Altmetric has tracked 24,885,505 research outputs across all sources so far. Compared to these this one has done well and is in the 83rd percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 8,149 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.2. This one has done well, scoring higher than 89% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 375,761 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 81% of its contemporaries.
We're also able to compare this research output to 471 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 91% of its contemporaries.